BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009H04SP1|AL426109
(832 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1713 1590 0.0
>3x_Contig1713
Length = 18539
Score = 1590 bits (797), Expect = 0.0
Identities = 821/833 (98%), Gaps = 1/833 (0%)
Strand = Plus / Minus
Query: 1 gacaattgacggacccaggtatttcagatcgatattaattgaccaatacagactgtataa 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14910 gacaattgaaggacccaggtatttcagatcgatattaattgaccaatacagactgtataa 14851
Query: 61 aggcccaacaggtgtcaattgggtgtggataatacggtgcaaaagttttaaatacagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14850 aggcccaacaggtgtcaattgggtgtggataatacggtgcaaaagttttaaatacagttt 14791
Query: 121 tagcmatgtcttatttgaataacccagctgttgtcatggacaatggtaccggtttgacga 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14790 tagcaatgtcttatttgaataacccagctgttgtcatggacaatggtaccggtttgacga 14731
Query: 181 aacttgggtttgcmggtaacgattctccatcgtgggtgtttcctacagcgattgccacag 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 14730 aacttgggtttgcaggtaacgattctccatcgtgggtgtttcctacagcgattgcaacag 14671
Query: 241 cacaatctggtaagagccaaagttctagtaacaagtctacagggtttggvtcatcttctg 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 14670 cacaatctggtaagagccaaagttctagtaacaagtctacagggtttggatcatcttctg 14611
Query: 301 ccaatgctcagagctcttatttgtctggaggtgggaattcgacaagtgcmactgatttcm 360
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 14610 ccaatgctcagagctcttatttgtctggaggtgggaattcgacaagtgcaactgatttca 14551
Query: 361 acagtttagccagcycgactttgatatcgaataaccttgctggaaagagaggtaccgagg 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14550 acagtttagccagctcgactttgatatcgaataaccttgctggaaagagaggtaccgagg 14491
Query: 421 acttggacttttatattggtaacgaggcgctagtagcatctcagggtccatcgtactcgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14490 acttggacttttatattggtaacgaggcgctagtagcatctcagggtccatcgtactcgt 14431
Query: 481 tgagttatcctatcagacacggtcaagtggaaaactgggatcatatggvaaggttttggg 540
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 14430 tgagttatcctatcagacacggtcaagtggaaaactgggatcatatggaaaggttttggg 14371
Query: 541 aaamttccatctttaaatatttgagaacagaaccagaggatcacttcttcttgcttaccg 600
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14370 aaaattccatctttaaatatttgagaacagaaccagaggatcacttcttcttgcttaccg 14311
Query: 601 aaccacctttgaatccaccagacaatagacaacaagttgcggaaattttctttgaaagtt 660
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 14310 aaccacctttgaatccaccagaaaatagacaacaagttgcggaaattttctttgaaagtt 14251
Query: 661 ttaattgtgcagggttgtacatcgcagtgcaagctgtgttggccttggctgcttcttgga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14250 ttaattgtgcagggttgtacatcgcagtgcaagctgtgttggccttggctgcttcttgga 14191
Query: 721 cttcttccaaggttacagatagatctttgacaggtaccgttatcgattctggtgatggtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14190 cttcttccaaggttacagatagatctttgacaggtaccgttatcgattctggtgatggtg 14131
Query: 781 t-acgcacgttattccagtcgctgaaggttatgtgattggatctgccatcaag 832
| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14130 taacgcacgttattccagtcgctgaaggttatgtgattggatctgccatcaag 14078
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4927
Number of Sequences: 1807
Number of extensions: 4927
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 832
length of database: 10,358,551
effective HSP length: 16
effective length of query: 816
effective length of database: 10,329,639
effective search space: 8428985424
effective search space used: 8428985424
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)